sigI protein (Clostridium celatum) - STRING interaction network

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sigI

Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. (219 aa)

Predicted Functional Partners:

EKY24451.1

0.963

rpoA

0.805

rpoB

0.790

rpoC

0.790

rpoZ

0.788

EKY28059.1

0.656

spoIIAB

0.656

EKY29105.1

0.580

EKY26660.1

0.512

EKY27374.1

0.511

Your Current Organism:

Clostridium celatum

NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EKY24451.1	sigI	HMPREF0216_02674	HMPREF0216_02673	Hypothetical protein; KEGG: cpv:cgd2_3700 2.3e-06 SWI/SNF related transcriptional regulator ATpase; K11647 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.	Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.	0.963
EKY26660.1	sigI	HMPREF0216_01845	HMPREF0216_02673	RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.	0.512
EKY26660.1	spoIIAB	HMPREF0216_01845	HMPREF0216_03136	RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	0.862
EKY27374.1	EKY28059.1	HMPREF0216_01407	HMPREF0216_00901	Diguanylate cyclase domain protein.	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	0.555
EKY27374.1	EKY29105.1	HMPREF0216_01407	HMPREF0216_00464	Diguanylate cyclase domain protein.	Hypothetical protein.	0.439
EKY27374.1	sigI	HMPREF0216_01407	HMPREF0216_02673	Diguanylate cyclase domain protein.	Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.	0.511
EKY27374.1	spoIIAB	HMPREF0216_01407	HMPREF0216_03136	Diguanylate cyclase domain protein.	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	0.555
EKY28059.1	EKY27374.1	HMPREF0216_00901	HMPREF0216_01407	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	Diguanylate cyclase domain protein.	0.555
EKY28059.1	sigI	HMPREF0216_00901	HMPREF0216_02673	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.	0.656
EKY29105.1	EKY27374.1	HMPREF0216_00464	HMPREF0216_01407	Hypothetical protein.	Diguanylate cyclase domain protein.	0.439
EKY29105.1	sigI	HMPREF0216_00464	HMPREF0216_02673	Hypothetical protein.	Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.	0.580
rpoA	rpoB	HMPREF0216_01183	HMPREF0216_01481	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	HMPREF0216_01183	HMPREF0216_01482	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	HMPREF0216_01183	HMPREF0216_01823	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoA	sigI	HMPREF0216_01183	HMPREF0216_02673	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.	0.805
rpoB	rpoA	HMPREF0216_01481	HMPREF0216_01183	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	HMPREF0216_01481	HMPREF0216_01482	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	HMPREF0216_01481	HMPREF0216_01823	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.992
rpoB	sigI	HMPREF0216_01481	HMPREF0216_02673	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.	0.790
rpoC	rpoA	HMPREF0216_01482	HMPREF0216_01183	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999

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