STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY24451.1Hypothetical protein; KEGG: cpv:cgd2_3700 2.3e-06 SWI/SNF related transcriptional regulator ATpase; K11647 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4. (291 aa)    
Predicted Functional Partners:
sigI
Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
 
 
 0.975
EKY24166.1
N-acetylmuramoyl-L-alanine amidase; KEGG: ccb:Clocel_2663 1.8e-48 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
    
  0.763
EKY29024.1
Hypothetical protein; KEGG: btl:BALH_2691 5.4e-05 sensor histidine kinase K07706; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.543
EKY27387.1
Hypothetical protein.
  
     0.523
EKY28650.1
Hypothetical protein; KEGG: smf:Smon_0763 0.0069 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.504
EKY24077.1
Hypothetical protein; KEGG: edi:EDI_341030 7.1e-05 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.504
EKY28093.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.492
EKY22237.1
Condensation domain protein; KEGG: ppy:PPE_00083 2.2e-20 bacitracin synthetase 3; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.418
EKY27437.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.410
EKY28336.1
KEGG: cno:NT01CX_2060 1.4e-10 putative AgrB-like protein, putative K07813; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.407
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.