STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY24460.1TIGR00268 family protein; KEGG: pmc:P9515_17581 3.9e-47 PP family ATPase K06864; Psort location: Cytoplasmic, score: 7.50. (273 aa)    
Predicted Functional Partners:
EKY24458.1
Hypothetical protein; KEGG: sat:SYN_00474 7.9e-65 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit K06898.
 
  
 0.979
larC
TIGR00299 family protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
  
 0.969
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
 
    0.690
EKY24457.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: ava:Ava_1414 2.6e-14 aldo/keto reductase; K05885 2,5-diketo-D-gluconate reductase K07079; Psort location: Cytoplasmic, score: 7.50.
 
    0.616
EKY24461.1
4Fe-4S binding domain protein; KEGG: lbi:LEPBI_I2457 5.8e-14 putative thioredoxin-disulfide reductase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.524
EKY27368.1
PP-loop family protein; KEGG: fbl:Fbal_1913 2.1e-32 tRNA s(2)C-32 sulfurtransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the TtcA family.
 
    0.503
EKY27751.1
Hydrolase, haloacid dehalogenase-like family protein; KEGG: hiq:CGSHiGG_02755 1.4e-53 glucuronate isomerase; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.432
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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