STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY24402.1Hypothetical protein; KEGG: apb:SAR116_2179 8.7e-06 predicted permease K07090; Psort location: CytoplasmicMembrane, score: 10.00. (128 aa)    
Predicted Functional Partners:
EKY24403.1
Hypothetical protein; KEGG: apb:SAR116_2179 1.5e-06 predicted permease K07090; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.956
EKY25988.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.541
EKY23236.1
KEGG: cpr:CPR_1421 1.6e-178 hemD; uroporphyrinogen-III methyltransferase/synthase K13542; Psort location: Cytoplasmic, score: 7.50.
    
 0.493
EKY24020.1
Hypothetical protein.
  
     0.469
EKY23997.1
Hypothetical protein.
  
     0.438
EKY28129.1
Hypothetical protein.
  
     0.431
EKY27418.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.400
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.