STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY24403.1Hypothetical protein; KEGG: apb:SAR116_2179 1.5e-06 predicted permease K07090; Psort location: CytoplasmicMembrane, score: 10.00. (122 aa)    
Predicted Functional Partners:
EKY24402.1
Hypothetical protein; KEGG: apb:SAR116_2179 8.7e-06 predicted permease K07090; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.957
EKY25988.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.491
EKY27760.1
PDZ/DHR/GLGF domain protein; KEGG: cyn:Cyan7425_3672 5.6e-05 2-alkenal reductase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.476
EKY27627.1
Trypsin; KEGG: cbe:Cbei_0379 4.1e-100 2-alkenal reductase.
    
 
 0.476
EKY27248.1
Hypothetical protein; KEGG: ctc:CTC00192 2.9e-44 periplasmic trypsin-like serine protease; K01362; Psort location: Cytoplasmic, score: 7.50.
    
 
 0.476
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.