STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY24414.1Hypothetical protein; KEGG: cbk:CLL_A3159 6.7e-13 RelA/SpoT family protein; K07816 putative GTP pyrophosphokinase. (47 aa)    
Predicted Functional Partners:
EKY26434.1
Adenylate cyclase; KEGG: cbe:Cbei_4540 1.5e-63 adenylate cyclase; K05873 adenylate cyclase, class 2; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.875
EKY24413.1
KEGG: cbe:Cbei_4602 3.6e-92 RelA/SpoT domain-containing protein; K07816 putative GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.872
EKY26218.1
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
 0.827
EKY27840.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.798
EKY24412.1
Hypothetical protein; KEGG: fps:FP0710 0.00018 two-component system sensor histidine kinase; Psort location: Cytoplasmic, score: 7.50.
       0.761
EKY23319.1
KEGG: ebr:ECB_01448 7.3e-25 yddV; predicted diguanylate cyclase; K13069 diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 8.78.
    
  0.759
EKY22134.1
Tetratricopeptide repeat protein; KEGG: hor:Hore_12160 4.2e-06 peptidyl-prolyl cis-trans isomerase; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.653
EKY24415.1
Ser/Thr phosphatase family protein; KEGG: cno:NT01CX_1367 1.3e-87 phoshohydrolase K07099.
 
     0.584
EKY27731.1
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.581
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
    0.539
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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