Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY24420.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (137 aa)    
Predicted Functional Partners:
EKY27305.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 
 0.910
EKY27869.1
DNA replication protein DnaC; KEGG: apb:SAR116_1558 0.0015 ATPase K02313; Psort location: Cytoplasmic, score: 9.97.
  
 
 
 0.734
EKY24421.1
Divergent AAA domain protein; KEGG: mmp:MMP0460 3.2e-19 hypothetical protein; K03655 ATP-dependent DNA helicase RecG; Psort location: Cytoplasmic, score: 7.50.
 
     0.624
EKY24415.1
Ser/Thr phosphatase family protein; KEGG: cno:NT01CX_1367 1.3e-87 phoshohydrolase K07099.
 
     0.592
EKY24418.1
tyrosine--tRNA ligase; KEGG: cbk:CLL_A3166 7.2e-119 tyrS; tyrosyl-tRNA synthetase K01866; Psort location: Cytoplasmic, score: 9.95.
 
   
 0.578
EKY24419.1
Hypothetical protein; KEGG: cbk:CLL_A3166 2.9e-67 tyrS; tyrosyl-tRNA synthetase K01866; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.578
EKY29620.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
   
 
 0.563
EKY28999.1
Replicative DNA helicase.
   
 
 0.563
EKY22801.1
KEGG: cbt:CLH_3374 4.5e-46 dnaB; replicative DNA helicase K02314; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.563
EKY22237.1
Condensation domain protein; KEGG: ppy:PPE_00083 2.2e-20 bacitracin synthetase 3; Psort location: Cytoplasmic, score: 7.50.
     
 0.559
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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