Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY24422.1Hypothetical protein; Psort location: Extracellular, score: 8.91. (64 aa)    
Predicted Functional Partners:
EKY24423.1
Germination protein, Ger(x)C family; Psort location: CytoplasmicMembrane, score: 9.51.
       0.645
EKY24424.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.35.
       0.645
EKY24421.1
Divergent AAA domain protein; KEGG: mmp:MMP0460 3.2e-19 hypothetical protein; K03655 ATP-dependent DNA helicase RecG; Psort location: Cytoplasmic, score: 7.50.
       0.639
EKY24425.1
Spore germination protein; KEGG: zin:ZICARI_096 0.0054 nuoN; putative NADH:ubiquinone oxidoreductase I, membrane subunit N; K00343 NADH dehydrogenase I subunit N; Psort location: CytoplasmicMembrane, score: 10.00.
       0.461
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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