Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY24424.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.35. (469 aa)    
Predicted Functional Partners:
EKY24423.1
Germination protein, Ger(x)C family; Psort location: CytoplasmicMembrane, score: 9.51.
 
  
 0.953
EKY22769.1
KEGG: bao:BAMF_1841 2.1e-71 spoVAD1; stage V sporulation protein AD.
  
  
 0.806
EKY22770.1
Stage V sporulation protein AC; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.796
EKY24425.1
Spore germination protein; KEGG: zin:ZICARI_096 0.0054 nuoN; putative NADH:ubiquinone oxidoreductase I, membrane subunit N; K00343 NADH dehydrogenase I subunit N; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.791
EKY22768.1
Stage V sporulation protein AE; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.785
EKY27642.1
Stage II sporulation protein R; Psort location: Cytoplasmic, score: 7.50.
 
    0.780
EKY27008.1
SpoIVB peptidase; KEGG: cbk:CLL_A2396 2.2e-124 spoIVB; stage IV sporulation protein B K06399.
  
     0.774
EKY26645.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.773
EKY27243.1
Stage V sporulation protein T; Psort location: Cytoplasmic, score: 9.97.
  
     0.772
EKY26661.1
RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.771
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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