STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY23998.1Putative sporulation protein YtxC. (296 aa)    
Predicted Functional Partners:
EKY26993.1
Stage III sporulation protein AE; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.751
EKY27934.1
Hypothetical protein; KEGG: ddi:DDB_G0283391 2.7e-05 kinX; LISK family protein kinase; K05743 LIM domain kinase 1; Psort location: Cytoplasmic, score: 7.50.
  
     0.739
EKY29796.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.736
EKY27237.1
Spore cortex biosynthesis protein YabQ; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.728
EKY27760.1
PDZ/DHR/GLGF domain protein; KEGG: cyn:Cyan7425_3672 5.6e-05 2-alkenal reductase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.709
EKY27024.1
Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.688
EKY22275.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.681
EKY25607.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.677
EKY27674.1
Putative sporulation protein YyaC; Psort location: Cytoplasmic, score: 7.50.
  
     0.663
EKY27629.1
Spore coat protein, CotS family; KEGG: pkn:PKH_134520 0.00063 choline kinase; K00866 choline kinase; Psort location: Cytoplasmic, score: 7.50.
  
    0.659
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.