Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY24016.1Tetratricopeptide repeat protein. (262 aa)    
Predicted Functional Partners:
EKY24015.1
Protein, SNF2 family.
 
     0.738
EKY24017.1
Hypothetical protein.
       0.592
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
 
 
0.568
EKY29664.1
Tetratricopeptide repeat protein; KEGG: ath:AT3G04240 9.0e-12 SEC; SEC (secret agent); transferase, transferring glycosyl groups; K09667 polypeptide N-acetylglucosaminyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.481
EKY24018.1
Isopentenyl-diphosphate delta-isomerase.
       0.416
EKY24014.1
Putative membrane protein.
       0.400
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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