Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY24037.1Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family. (366 aa)    
Predicted Functional Partners:
EKY29465.1
Pyruvate synthase; KEGG: cbt:CLH_0756 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
    
  0.772
EKY29370.1
Hypothetical protein; KEGG: cbk:CLL_A0790 9.0e-128 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
    
  0.772
EKY25379.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
    
  0.772
EKY25396.1
Pyruvate synthase; KEGG: cbt:CLH_2077 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
    
  0.772
EKY26187.1
Phage integrase, SAM-like domain protein; Belongs to the 'phage' integrase family.
  
  
 0.674
EKY22904.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 1.4e-17 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.655
EKY27025.1
Phage integrase, SAM-like domain protein; KEGG: apb:SAR116_1837 3.0e-26 phage integrase family protein K03733; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
  
  
 0.614
EKY22210.1
comF family protein; KEGG: fth:FTH_0402 4.1e-20 amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 7.50.
   
    0.434
EKY24038.1
DNA-binding helix-turn-helix protein.
  
    0.425
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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