Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY24041.1Toxin-antitoxin system, toxin component, Bro family. (235 aa)    
Predicted Functional Partners:
EKY24042.1
Hypothetical protein.
       0.718
EKY24040.1
DNA-binding helix-turn-helix protein.
       0.714
EKY24039.1
Toxin-antitoxin system, antitoxin component, Xre family.
       0.621
EKY24043.1
Hypothetical protein.
       0.598
EKY24044.1
Hypothetical protein.
       0.598
EKY24045.1
Hypothetical protein.
       0.592
EKY23485.1
Pentapeptide repeat protein; KEGG: btk:BT9727_2180 9.2e-05 acetyltransferase K00680; Psort location: Cytoplasmic, score: 7.50.
 
     0.582
EKY27390.1
GDSL-like protein.
  
     0.579
EKY23483.1
KEGG: edi:EDI_025770 0.0061 protein serine/threonine kinase; Psort location: Extracellular, score: 8.91.
  
     0.562
EKY28166.1
Glycosyl hydrolase family 25.
  
     0.543
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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