Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY24047.1YqaJ viral recombinase family protein. (353 aa)    
Predicted Functional Partners:
EKY24049.1
Putative phage recombination protein Bet.
 
  
 0.966
EKY24048.1
Hypothetical protein.
       0.752
EKY24050.1
DnaD domain protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.712
EKY24051.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.688
EKY24045.1
Hypothetical protein.
       0.596
EKY24060.1
KEGG: sax:USA300HOU_1986 8.5e-13 rusA; crossover junction endodeoxyribonuclease RusA; Psort location: Cytoplasmic, score: 7.50.
 
     0.535
EKY24052.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.522
EKY24043.1
Hypothetical protein.
       0.489
EKY24044.1
Hypothetical protein.
       0.489
EKY24041.1
Toxin-antitoxin system, toxin component, Bro family.
       0.432
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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