Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY24050.1DnaD domain protein; Psort location: Cytoplasmic, score: 7.50. (279 aa)    
Predicted Functional Partners:
EKY24051.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.806
EKY24047.1
YqaJ viral recombinase family protein.
 
    0.712
EKY24049.1
Putative phage recombination protein Bet.
  
    0.678
EKY24052.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.645
EKY24048.1
Hypothetical protein.
       0.636
EKY22777.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.605
EKY23313.1
Accessory protein regulator protein B; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.568
EKY25384.1
KEGG: cdf:CD2503 7.0e-08 cation-transporting ATPase K01529.
  
     0.536
EKY24053.1
Hypothetical protein.
       0.505
EKY24054.1
Hypothetical protein; KEGG: cbk:CLL_A2776 5.0e-08 putative glucose-1-phosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.505
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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