Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY23880.1BRO family protein. (225 aa)    
Predicted Functional Partners:
EKY24059.1
BRO family protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.598
EKY28089.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
  
    0.586
EKY23881.1
Hypothetical protein.
       0.581
EKY23879.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.574
EKY28114.1
N-6 DNA Methylase; KEGG: gyc:GYMC61_0285 2.1e-105 N-6 DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 7.50.
       0.547
EKY28098.1
Virulence-associated protein E; Psort location: Cytoplasmic, score: 7.50.
 
     0.494
EKY28102.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.468
EKY23882.1
Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 7.50.
     
 0.465
EKY28101.1
Hypothetical protein.
 
     0.447
EKY22791.1
Hypothetical protein.
 
    0.443
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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