Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY23888.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (197 aa)    
Predicted Functional Partners:
EKY23889.1
Hypothetical protein.
 
     0.836
EKY23885.1
Putative phage minor capsid protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.771
EKY23897.1
Bacteriophage Gp15 protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.735
EKY23892.1
Hypothetical protein.
       0.696
EKY23895.1
Hypothetical protein.
       0.692
EKY23894.1
Hypothetical protein.
       0.687
EKY23890.1
Hypothetical protein; KEGG: edi:EDI_341030 0.0059 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
       0.679
EKY23886.1
Hypothetical protein; KEGG: tsi:TSIB_1798 0.0021 atpH; V-type ATP synthase subunit H; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 7.50.
 
     0.670
EKY23884.1
Hypothetical protein.
 
     0.648
EKY23893.1
Hypothetical protein.
       0.643
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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