STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY23899.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
EKY23901.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     0.973
EKY28065.1
Toxin secretion/phage lysis holin.
 
    0.725
EKY23897.1
Bacteriophage Gp15 protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.683
EKY28737.1
Preprotein translocase, YajC subunit; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.651
EKY23894.1
Hypothetical protein.
 
     0.651
EKY23898.1
Hypothetical protein.
       0.598
EKY23896.1
Hypothetical protein; KEGG: cbo:CBO1875 0.0074 hom, tdm; homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 7.50.
       0.529
EKY28740.1
KEGG: vfi:VF_A1002 5.9e-37 agaC; PTS system, N-acetylgalactosamine-specific IIC component K02746; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.527
EKY23900.1
HNH endonuclease domain protein; KEGG: sds:SDEG_1118 4.2e-66 putative endodeoxyribonuclease.
       0.488
EKY28067.1
Phage minor structural protein.
 
  
 0.476
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.