Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY23900.1HNH endonuclease domain protein; KEGG: sds:SDEG_1118 4.2e-66 putative endodeoxyribonuclease. (191 aa)    
Predicted Functional Partners:
EKY23901.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.512
EKY23899.1
Hypothetical protein.
       0.488
EKY23902.1
Phage tail component protein.
       0.449
EKY28088.1
Hypothetical protein.
     
  0.442
EKY23903.1
Hypothetical protein.
       0.436
EKY23904.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.436
EKY23905.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.436
EKY23906.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.423
EKY23907.1
Hypothetical protein; KEGG: isc:IscW_ISCW014473 1.1e-05 basement membrane collagen, putative; Psort location: Cytoplasmic, score: 7.50.
       0.423
EKY23897.1
Bacteriophage Gp15 protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.403
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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