Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKY23860.1 | EKY23861.1 | HMPREF0216_02873 | HMPREF0216_02874 | KEGG: ckl:CKL_1926 1.5e-38 phage-related amidase; K01447 N-acetylmuramoyl-L-alanine amidase. | Toxin-antitoxin system, toxin component, RelE family. | 0.461 |
EKY23860.1 | EKY23862.1 | HMPREF0216_02873 | HMPREF0216_02875 | KEGG: ckl:CKL_1926 1.5e-38 phage-related amidase; K01447 N-acetylmuramoyl-L-alanine amidase. | Addiction module antidote protein HigA; Psort location: Cytoplasmic, score: 7.50. | 0.461 |
EKY23861.1 | EKY23860.1 | HMPREF0216_02874 | HMPREF0216_02873 | Toxin-antitoxin system, toxin component, RelE family. | KEGG: ckl:CKL_1926 1.5e-38 phage-related amidase; K01447 N-acetylmuramoyl-L-alanine amidase. | 0.461 |
EKY23861.1 | EKY23862.1 | HMPREF0216_02874 | HMPREF0216_02875 | Toxin-antitoxin system, toxin component, RelE family. | Addiction module antidote protein HigA; Psort location: Cytoplasmic, score: 7.50. | 0.996 |
EKY23862.1 | EKY23860.1 | HMPREF0216_02875 | HMPREF0216_02873 | Addiction module antidote protein HigA; Psort location: Cytoplasmic, score: 7.50. | KEGG: ckl:CKL_1926 1.5e-38 phage-related amidase; K01447 N-acetylmuramoyl-L-alanine amidase. | 0.461 |
EKY23862.1 | EKY23861.1 | HMPREF0216_02875 | HMPREF0216_02874 | Addiction module antidote protein HigA; Psort location: Cytoplasmic, score: 7.50. | Toxin-antitoxin system, toxin component, RelE family. | 0.996 |