Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY23775.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rrs:RoseRS_2626 2.7e-41 integral membrane sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78. (399 aa)    
Predicted Functional Partners:
EKY23776.1
Transcriptional regulatory protein; KEGG: rha:RHA1_ro05622 5.1e-22 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 
  0.968
EKY27374.1
Diguanylate cyclase domain protein.
  
 0.860
EKY26016.1
Redoxin family protein; KEGG: cbi:CLJ_B0317 2.0e-12 antioxidant, AhpC/TSA family.
 
   0.818
EKY22585.1
Putative heme response regulator HssR; KEGG: pme:NATL1_11471 1.5e-38 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
  
  0.804
EKY29808.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: pme:NATL1_11471 9.4e-46 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
 
 0.783
EKY28401.1
Putative heme response regulator HssR.
  
  0.782
EKY27434.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cbe:Cbei_4484 2.1e-22 multi-sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.779
EKY28120.1
Response regulator receiver domain protein; KEGG: aby:ABAYE0600 1.0e-39 baeR; OmpR family transcriptional regulator K07664; Psort location: Cytoplasmic, score: 9.97.
  
  0.768
EKY26015.1
4Fe-4S binding domain protein; KEGG: nis:NIS_1806 5.8e-13 napH; quinol dehydrogenase membrane component K02574; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.766
EKY23560.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: npu:Npun_F4214 2.0e-36 two component transcriptional regulator K07657; Psort location: Cytoplasmic, score: 9.97.
  
  0.765
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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