Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY23739.1KEGG: cbt:CLH_3299 1.4e-81 hypothetical protein; K03101 signal peptidase II; Psort location: CytoplasmicMembrane, score: 10.00. (255 aa)    
Predicted Functional Partners:
EKY24410.1
Hypothetical protein; KEGG: mba:Mbar_A3234 0.0014 ksgA; dimethyladenosine transferase K02528; Psort location: Cytoplasmic, score: 7.50.
  
    0.761
EKY22777.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.721
EKY27390.1
GDSL-like protein.
  
     0.720
EKY26284.1
Hypothetical protein; KEGG: mei:Msip34_1448 4.4e-07 DNA polymerase III, epsilon subunit K02342.
  
     0.717
EKY26994.1
Putative stage III sporulation protein AF; Psort location: Cytoplasmic, score: 7.50.
  
     0.696
EKY23213.1
Hypothetical protein; KEGG: pfa:PF14_0327 0.00042 methionine aminopeptidase, type II, putative; K01265 methionyl aminopeptidase.
  
     0.692
EKY22261.1
Hypothetical protein.
 
     0.665
EKY22134.1
Tetratricopeptide repeat protein; KEGG: hor:Hore_12160 4.2e-06 peptidyl-prolyl cis-trans isomerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.663
EKY26094.1
Hypothetical protein; KEGG: gfo:GFO_2687 3.4e-05 L-sorbosone dehydrogenase K00100.
  
     0.661
EKY27237.1
Spore cortex biosynthesis protein YabQ; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.654
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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