Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY23221.1KEGG: ppr:PBPRB1006 0.0022 hypothetical protein; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 7.50. (303 aa)    
Predicted Functional Partners:
EKY27364.1
Hypothetical protein.
  
     0.615
EKY23220.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.546
EKY23301.1
Hypothetical protein; KEGG: tga:TGAM_0803 0.0077 rpoP; DNA-directed RNA polymerase subunit P K03059.
  
     0.532
EKY27023.1
HDIG domain protein; KEGG: sat:SYN_01518 6.7e-10 poly A polymerase K00970; Psort location: Cytoplasmic, score: 7.50.
  
     0.493
EKY23223.1
KEGG: bmq:BMQ_0360 1.2e-221 yfmM; putative efflux ABC transporter, ATP-binding protein; Psort location: Cytoplasmic, score: 9.95.
       0.486
EKY23215.1
Proline-specific peptidase; KEGG: ckl:CKL_0764 4.2e-98 esterase K00433; Psort location: Cytoplasmic, score: 7.50.
  
     0.442
EKY26446.1
FAD dependent oxidoreductase; KEGG: ctc:CTC00417 9.5e-101 oxidoreductase K00100; Psort location: Cytoplasmic, score: 7.50.
 
     0.415
EKY29086.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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