STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY23224.1Toxin-antitoxin system toxin component, PIN family; Psort location: Cytoplasmic, score: 7.50. (192 aa)    
Predicted Functional Partners:
EKY23225.1
Putrescine ABC transporter, periplasmic spermidine; KEGG: apb:SAR116_2031 4.1e-29 extracellular solute-binding protein, family 1 K11073.
       0.568
EKY23223.1
KEGG: bmq:BMQ_0360 1.2e-221 yfmM; putative efflux ABC transporter, ATP-binding protein; Psort location: Cytoplasmic, score: 9.95.
       0.555
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.