STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY23228.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (336 aa)    
Predicted Functional Partners:
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.534
EKY23227.1
Branched-chain-amino-acid transaminase; KEGG: ckl:CKL_3620 3.3e-146 ilvE3; branched-chain amino acid aminotransferase K00826; Psort location: Cytoplasmic, score: 7.50.
       0.516
pheT
phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
   0.493
EKY25793.1
Acetyltransferase, GNAT family.
 
    0.462
EKY26344.1
Aldehyde-alcohol dehydrogenase; KEGG: cbt:CLH_1998 0. bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.443
EKY27017.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.422
EKY24041.1
Toxin-antitoxin system, toxin component, Bro family.
  
     0.414
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.