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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22904.1Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 1.4e-17 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 9.67. (203 aa)    
Predicted Functional Partners:
EKY22903.1
Putative transposase; KEGG: zin:ZICARI_050 0.0071 rpoB; putative DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta; Psort location: CytoplasmicMembrane, score: 9.55.
     0.911
EKY29465.1
Pyruvate synthase; KEGG: cbt:CLH_0756 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
    
  0.785
EKY29370.1
Hypothetical protein; KEGG: cbk:CLL_A0790 9.0e-128 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
    
  0.785
EKY25379.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
    
  0.785
EKY25396.1
Pyruvate synthase; KEGG: cbt:CLH_2077 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
    
  0.785
EKY22905.1
Hypothetical protein.
       0.773
EKY24037.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
  
 0.654
EKY27153.1
Putative stage III sporulation protein E; KEGG: pen:PSEEN2212 6.3e-104 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.505
EKY26587.1
FtsK/SpoIIIE family protein; KEGG: eci:UTI89_C0905 6.3e-11 ftsK; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 8.78.
  
   
 0.441
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.424
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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