Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY22884.1Putative septum site-determining protein MinC. (373 aa)    
Predicted Functional Partners:
EKY22885.1
KEGG: btk:BT9727_3349 5.3e-20 RNA polymerase ECF-type sigma factor K03088; Psort location: Cytoplasmic, score: 9.67; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.814
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
 
 0.629
EKY23487.1
Hypothetical protein; KEGG: zin:ZICARI_164 0.00048 sucB; putative 2-oxoglutarate dehydrogenase, E2 subunit; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
  
 
 0.614
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.605
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.603
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.564
EKY22237.1
Condensation domain protein; KEGG: ppy:PPE_00083 2.2e-20 bacitracin synthetase 3; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.477
EKY23304.1
Dockerin type I repeat-containing domain protein; KEGG: fsu:Fisuc_1993 1.1e-05 pectate lyase.
  
 
   0.464
EKY22883.1
Hypothetical protein.
  
    0.463
EKY23305.1
F5/8 type C domain protein; KEGG: cpf:CPF_1442 4.7e-15 putative hyaluronidase; K01197 hyaluronoglucosaminidase; Psort location: Extracellular, score: 8.19.
  
 
   0.425
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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