STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22722.1UBA/TS-N domain protein. (204 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.827
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.827
EKY22725.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.793
EKY22726.1
PAP2 family protein; KEGG: cbe:Cbei_0844 6.1e-90 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.739
EKY22721.1
Putative transcriptional repressor CcpN; KEGG: lsg:lse_1845 1.0e-41 CBS domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.672
EKY27934.1
Hypothetical protein; KEGG: ddi:DDB_G0283391 2.7e-05 kinX; LISK family protein kinase; K05743 LIM domain kinase 1; Psort location: Cytoplasmic, score: 7.50.
  
     0.664
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.653
EKY27054.1
Oxidoreductase NAD-binding domain protein; KEGG: aar:Acear_0062 3.3e-17 sulfide dehydrogenase (flavoprotein) subunit SudB K00528; Psort location: Cytoplasmic, score: 9.97.
  
     0.635
EKY27055.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; KEGG: kol:Kole_0031 3.6e-06 tRNA (uracil-5-)-methyltransferase Gid K04094; Psort location: Cytoplasmic, score: 7.50.
  
    0.626
EKY23998.1
Putative sporulation protein YtxC.
  
     0.620
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.