Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY22725.1Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (138 aa)    
Predicted Functional Partners:
EKY27027.1
KEGG: cpe:CPE1807 7.0e-160 deoA; pyrimidine-nucleoside phosphorylase; K00756 pyrimidine-nucleoside phosphorylase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.951
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
  
 0.940
tdk
Thymidine kinase; KEGG: cbt:CLH_0472 8.2e-79 tdk; thymidine kinase K00857; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.908
udk
Uridine kinase.
    
 0.890
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.838
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
  
 0.833
EKY28194.1
Phosphoribulokinase/uridine kinase family protein.
    
 0.825
EKY26192.1
LPXTG-motif protein cell wall anchor domain protein; Belongs to the 5'-nucleotidase family.
 
  
  0.814
EKY28449.1
KEGG: cpr:CPR_1971 1.3e-112 IunH family nucleoside hydrolase; K01239 purine nucleosidase; Psort location: Cytoplasmic, score: 7.50.
   
 0.802
EKY26258.1
Deoxynucleoside kinase; KEGG: cbt:CLH_1831 2.0e-84 deoxyguanosIne kinase; Psort location: Cytoplasmic, score: 7.50.
    
 0.801
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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