Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY22729.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (75 aa)    
Predicted Functional Partners:
EKY22731.1
Sporulation protein YqfC; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.962
EKY22730.1
Sporulation protein YqfD; Psort location: Cytoplasmic, score: 7.50.
       0.773
EKY22728.1
7TM-HD extracellular; KEGG: bmd:BMD_4538 3.4e-96 metal-dependent phosphohydrolase K07037; Psort location: CytoplasmicMembrane, score: 10.00.
       0.707
EKY22732.1
Hypothetical protein.
       0.520
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.463
EKY22726.1
PAP2 family protein; KEGG: cbe:Cbei_0844 6.1e-90 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.446
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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