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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22732.1Hypothetical protein. (32 aa)    
Predicted Functional Partners:
EKY22729.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.520
EKY22730.1
Sporulation protein YqfD; Psort location: Cytoplasmic, score: 7.50.
       0.520
EKY22731.1
Sporulation protein YqfC; Psort location: Cytoplasmic, score: 7.50.
       0.520
EKY22728.1
7TM-HD extracellular; KEGG: bmd:BMD_4538 3.4e-96 metal-dependent phosphohydrolase K07037; Psort location: CytoplasmicMembrane, score: 10.00.
       0.467
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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