STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmARibosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (313 aa)    
Predicted Functional Partners:
EKY22736.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
  
 0.900
EKY22735.1
tRNA methylthiotransferase YqeV; KEGG: ctc:CTC02027 4.3e-144 Fe-S oxidoreductase K03423; Psort location: Cytoplasmic, score: 7.50.
  
    0.883
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
  
 
 
 0.834
EKY26632.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
  
 0.677
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
 
  
 0.625
EKY22734.1
KEGG: rno:690660 5.2e-29 Hint1, Pkci, Prkci; histidine triad nucleotide binding protein 1.
       0.596
rpsU
Ribosomal protein S21; KEGG: sew:SeSA_A3399 6.0e-12 rpsU; 30S ribosomal protein S21 K02970; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial ribosomal protein bS21 family.
     
 0.544
EKY29415.1
DnaJ domain protein; KEGG: tgo:TGME49_004480 8.2e-05 DnaJ domain-containing protein.
  
  
 0.500
EKY22126.1
Hypothetical protein.
  
  
 0.500
EKY22738.1
Acyltransferase; KEGG: bmd:BMD_2007 5.5e-10 acyltransferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.497
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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