STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22603.1KEGG: apb:SAR116_2450 0.00017 auxin efflux carrier K07088; Psort location: CytoplasmicMembrane, score: 10.00. (353 aa)    
Predicted Functional Partners:
EKY22604.1
KEGG: cpf:CPF_0510 2.0e-137 D-lactate dehydrogenase; K03778 D-lactate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.874
EKY29618.1
NAD-dependent malic enzyme; KEGG: cbe:Cbei_5075 2.9e-163 malate dehydrogenase.
  
  
 0.678
EKY22605.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpe:CPE0531 9.4e-165 sensor histidine kinase; K02476 two-component system, CitB family, sensor kinase; Psort location: CytoplasmicMembrane, score: 8.78.
 
     0.526
EKY22606.1
Putative transcriptional regulatory protein DcuR; KEGG: btk:BT9727_0488 2.3e-42 response regulator K11615; Psort location: Cytoplasmic, score: 9.67.
 
     0.512
EKY22602.1
Hypothetical protein; KEGG: cbb:CLD_3441 3.9e-05 sensor histidine kinase.
       0.427
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.