STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22496.1Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_1608 6.3e-40 inner-membrane translocator K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (359 aa)    
Predicted Functional Partners:
EKY22495.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_1609 9.0e-41 uncharacterized ABC-type transport system, permease component K02057; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.999
EKY22497.1
ABC transporter, ATP-binding protein; KEGG: cpe:CPE1579 7.1e-215 ABC transporter; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.999
EKY22499.1
Basic membrane protein; KEGG: apb:SAR116_1606 1.5e-17 membrane lipoprotein K07335.
 
 
 0.953
EKY22500.1
Basic membrane protein; KEGG: apb:SAR116_1606 2.8e-30 membrane lipoprotein K07335.
 
 
 0.953
EKY22502.1
Basic membrane protein; KEGG: apb:SAR116_1606 2.2e-14 membrane lipoprotein K07335; Psort location: CytoplasmicMembrane, score: 9.87.
 
 
 0.953
EKY22498.1
Hypothetical protein; KEGG: apb:SAR116_1606 1.4e-06 membrane lipoprotein K07335; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.951
EKY22501.1
Hypothetical protein; KEGG: apb:SAR116_1606 1.7e-05 membrane lipoprotein K07335; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.949
rbsA
Ribose transport ATP-binding protein rbsa; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
  0.606
EKY28726.1
KEGG: cpy:Cphy_2010 3.0e-159 ABC transporter related; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
  0.595
EKY25412.1
KEGG: bhy:BHWA1_02551 5.1e-189 mglA; galactose/methyl galaxtoside transporter ATP-binding protein; K10542 methyl-galactoside transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
  0.557
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.