STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22499.1Basic membrane protein; KEGG: apb:SAR116_1606 1.5e-17 membrane lipoprotein K07335. (207 aa)    
Predicted Functional Partners:
EKY22498.1
Hypothetical protein; KEGG: apb:SAR116_1606 1.4e-06 membrane lipoprotein K07335; Psort location: Cytoplasmic, score: 7.50.
     0.986
EKY22497.1
ABC transporter, ATP-binding protein; KEGG: cpe:CPE1579 7.1e-215 ABC transporter; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.964
EKY22495.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_1609 9.0e-41 uncharacterized ABC-type transport system, permease component K02057; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.954
EKY22496.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_1608 6.3e-40 inner-membrane translocator K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.953
EKY22501.1
Hypothetical protein; KEGG: apb:SAR116_1606 1.7e-05 membrane lipoprotein K07335; Psort location: Cytoplasmic, score: 7.50.
 
     0.945
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.