Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY22500.1Basic membrane protein; KEGG: apb:SAR116_1606 2.8e-30 membrane lipoprotein K07335. (357 aa)    
Predicted Functional Partners:
EKY22497.1
ABC transporter, ATP-binding protein; KEGG: cpe:CPE1579 7.1e-215 ABC transporter; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.943
EKY22495.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_1609 9.0e-41 uncharacterized ABC-type transport system, permease component K02057; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.924
EKY22496.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_1608 6.3e-40 inner-membrane translocator K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.916
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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