STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22512.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EKY22513.1
HDIG domain protein; KEGG: lsp:Bsph_0393 2.2e-21 3'-5' exoribonuclease YhaM K03698; Psort location: Cytoplasmic, score: 7.50.
       0.682
EKY22511.1
Signal peptide protein, YSIRK family; Psort location: CytoplasmicMembrane, score: 9.55.
       0.566
EKY22514.1
YhgE/Pip domain protein; KEGG: tva:TVAG_387410 2.2e-08 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: CytoplasmicMembrane, score: 10.00.
       0.407
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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