Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY22373.1Hypothetical protein; KEGG: cbl:CLK_2505 9.4e-38 putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 7.50. (666 aa)    
Predicted Functional Partners:
EKY22374.1
Pseudouridylate synthase; KEGG: cbe:Cbei_0345 9.1e-96 pseudouridine synthase; K06183 ribosomal small subunit pseudouridine synthase A; Psort location: Cytoplasmic, score: 9.97; Belongs to the pseudouridine synthase RsuA family.
       0.622
EKY22372.1
KEGG: apb:SAR116_1997 1.5e-06 YaiI/YqxD family protein, putative K09768; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0178 family.
       0.578
pgi
KEGG: cbk:CLL_A0403 4.0e-196 pgi; glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.
       0.512
EKY29076.1
Prepilin-type cleavage/methylation protein.
   
    0.462
EKY25785.1
SH3 domain protein.
  
 
 0.458
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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