Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY22247.1Thioesterase family protein; KEGG: reh:H16_A0188 1.5e-13 thioesterase; Psort location: Cytoplasmic, score: 7.50. (126 aa)    
Predicted Functional Partners:
EKY22248.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bth:BT_4050 4.8e-17 beta-galactosidase; K01190 beta-galactosidase; Psort location: Cellwall, score: 9.96.
       0.459
EKY22246.1
Orn/Lys/Arg decarboxylase, major domain protein; KEGG: hiq:CGSHiGG_06325 7.1e-270 ornithine decarboxylase K01581; Psort location: Cytoplasmic, score: 9.97.
       0.419
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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