Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY22251.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
EKY22252.1
comEA protein; KEGG: hor:Hore_06940 6.0e-06 glycogen/starch synthase, ADP-glucose type K00703; Psort location: CytoplasmicMembrane, score: 9.68.
       0.609
EKY22250.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.581
EKY22249.1
KEGG: cbt:CLH_0575 1.4e-184 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.499
EKY22253.1
KEGG: cbe:Cbei_0519 3.2e-77 serine-type D-Ala-D-Ala carboxypeptidase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S11 family.
       0.477
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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