Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY22267.1KEGG: cpf:CPF_2389 1.8e-58 M50 family peptidase K01417; Psort location: CytoplasmicMembrane, score: 10.00. (287 aa)    
Predicted Functional Partners:
EKY22268.1
Hypothetical protein.
       0.594
EKY22261.1
Hypothetical protein.
 
     0.589
EKY22263.1
S1 RNA binding domain protein; KEGG: cbe:Cbei_0507 2.2e-140 ribonuclease; K08301 ribonuclease G; Psort location: Cytoplasmic, score: 9.97.
       0.585
EKY22264.1
Radical SAM-linked protein; KEGG: sat:SYN_01355 0.00037 Fe-S oxidoreductase K03423.
       0.574
EKY22269.1
Rod shape-determining protein RodA; KEGG: hiq:CGSHiGG_09345 9.0e-41 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
  
    0.541
EKY22266.1
Hypothetical protein; KEGG: ctc:CTC02064 1.4e-32 Fe-S oxidoreductase K03423; Psort location: Cytoplasmic, score: 7.50.
       0.486
EKY22265.1
Radical SAM domain protein; KEGG: ctc:CTC02064 2.1e-192 Fe-S oxidoreductase K03423; Psort location: Cytoplasmic, score: 7.50.
       0.480
EKY27024.1
Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.477
EKY22275.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.474
rpmA
Ribosomal protein L27; KEGG: apb:SAR116_1855 2.6e-18 ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL27 family.
       0.470
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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