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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22269.1Rod shape-determining protein RodA; KEGG: hiq:CGSHiGG_09345 9.0e-41 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family. (377 aa)    
Predicted Functional Partners:
EKY22277.1
KEGG: apb:SAR116_0710 9.8e-99 cell shape determining protein MreB/Mrl K03569; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.915
EKY22274.1
KEGG: tmt:Tmath_0876 1.8e-46 penicillin-binding protein 2 K05515; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.910
EKY25108.1
Penicillin-binding protein dimerization domain protein.
 
 0.904
EKY26957.1
KEGG: cbe:Cbei_1578 2.3e-239 stage V sporulation protein D K08384; Psort location: CytoplasmicMembrane, score: 9.51.
 
 0.898
EKY26666.1
Penicillin-binding protein, transpeptidase domain protein.
  
 
 0.882
EKY27737.1
Penicillin-binding protein A family protein; KEGG: cbe:Cbei_4860 3.2e-148 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.878
EKY22273.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: tmt:Tmath_0876 2.4e-32 penicillin-binding protein 2 K05515.
 
 
 0.863
EKY22276.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
  
 0.861
EKY27673.1
Mbl protein; KEGG: apb:SAR116_0710 4.4e-87 cell shape determining protein MreB/Mrl K03569; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.840
EKY25109.1
PASTA domain protein.
 
 
 0.821
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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