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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22278.1KEGG: apb:SAR116_0666 1.5e-22 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0758 family. (229 aa)    
Predicted Functional Partners:
EKY22276.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.952
EKY22279.1
Maf-like protein; KEGG: apb:SAR116_1315 2.7e-09 nucleotide-binding protein implicated in inhibition of septum formation K06287; Psort location: Cytoplasmic, score: 7.50; Belongs to the Maf family.
 
  
 0.917
EKY22277.1
KEGG: apb:SAR116_0710 9.8e-99 cell shape determining protein MreB/Mrl K03569; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.886
EKY22275.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.855
EKY22274.1
KEGG: tmt:Tmath_0876 1.8e-46 penicillin-binding protein 2 K05515; Psort location: CytoplasmicMembrane, score: 8.78.
       0.757
EKY22210.1
comF family protein; KEGG: fth:FTH_0402 4.1e-20 amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 7.50.
 
    0.726
mutL
DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
 
   
 0.632
EKY27130.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 8.1e-24 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
     
 0.596
EKY23873.1
KEGG: btk:BT9727_3510 3.8e-81 mutS; DNA mismatch repair protein MutS K03555; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.588
EKY23874.1
MutS domain V protein; KEGG: bal:BACI_c37190 1.2e-114 mutS; DNA mismatch repair protein K03555; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.581
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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