STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22287.1MutS domain V protein; KEGG: btk:BT9727_3510 2.3e-15 mutS; DNA mismatch repair protein MutS K03555; Psort location: CytoplasmicMembrane, score: 10.00. (596 aa)    
Predicted Functional Partners:
mutL
DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
 
 0.981
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 0.933
EKY27305.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 0.932
EKY22286.1
Exonuclease; KEGG: bce:BC3538 3.5e-09 exonuclease; Psort location: Cytoplasmic, score: 7.50.
 
    0.846
EKY22289.1
Ser/Thr phosphatase family protein; KEGG: sax:USA300HOU_1836 2.0e-29 sbcD; DNA repair exonuclease; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.725
EKY22288.1
Phage tail component protein; KEGG: fnu:FN0522 3.7e-32 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 7.50.
       0.670
EKY22285.1
CBS domain protein; KEGG: phe:Phep_1434 1.7e-05 cysteine synthase; K01697 cystathionine beta-synthase; Psort location: Cytoplasmic, score: 7.50.
       0.596
EKY28185.1
ATP-dependent DNA helicase RecQ.
   
 0.553
EKY22199.1
KEGG: cpe:CPE0343 1.2e-217 recQ; ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ; Psort location: Cytoplasmic, score: 9.89.
   
 0.553
EKY25470.1
MutS domain V protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
 
0.498
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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