Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY22204.1Tex-like protein; KEGG: npu:Npun_R5425 7.7e-170 RNA-binding S1 domain-containing protein K06959; Psort location: Cytoplasmic, score: 9.97. (720 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.830
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.825
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
  0.792
EKY29013.1
Glycosyltransferase, group 2 family protein; KEGG: btk:BT9727_5106 1.6e-25 beta-1,3-N-acetylglucosaminyltransferase; Psort location: CytoplasmicMembrane, score: 9.51.
   
 0.744
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
 
  0.619
nnrD
YjeF domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
   
   0.568
EKY29664.1
Tetratricopeptide repeat protein; KEGG: ath:AT3G04240 9.0e-12 SEC; SEC (secret agent); transferase, transferring glycosyl groups; K09667 polypeptide N-acetylglucosaminyltransferase; Psort location: Cytoplasmic, score: 7.50.
    
  0.545
EKY29665.1
KEGG: apb:SAR116_1308 1.6e-06 TPR repeat protein; Psort location: Cytoplasmic, score: 7.50.
    
  0.545
EKY28898.1
Hypothetical protein; KEGG: bmq:BMQ_1592 0.00025 sacC; levanase.
    
  0.545
EKY26162.1
Tetratricopeptide repeat protein.
    
  0.545
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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