STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22162.1LysR substrate binding domain protein; KEGG: mct:MCR_1819 8.7e-27 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family. (288 aa)    
Predicted Functional Partners:
EKY22163.1
KEGG: shn:Shewana3_3300 6.9e-15 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.
 
     0.586
EKY22164.1
KEGG: apb:SAR116_1094 5.7e-14 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.
       0.530
EKY28426.1
Class II glutamine amidotransferase.
  
  
 0.515
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.