Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY22040.1Transcriptional regulator, TetR family. (163 aa)    
Predicted Functional Partners:
EKY22041.1
Hypothetical protein; KEGG: ddi:DDB_G0281415 0.0017 hypothetical protein; K08656 dipeptidyl-peptidase 9.
 
     0.691
EKY29648.1
Hypothetical protein.
  
     0.556
EKY24465.1
Transcriptional regulator, TetR family.
  
     0.547
EKY25463.1
HTH domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.504
EKY25390.1
Hypothetical protein.
  
     0.498
EKY26721.1
Hypothetical protein; KEGG: edi:EDI_341030 1.2e-08 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
  
     0.458
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.427
EKY25978.1
KEGG: fpl:Ferp_1041 6.6e-32 CoA-substrate-specific enzyme activase; Psort location: Cytoplasmic, score: 7.50.
     
 0.409
EKY22367.1
Hypothetical protein; KEGG: tet:TTHERM_01046870 3.5e-08 Protein kinase domain containing protein K08282.
  
   
 0.402
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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