close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22042.1RelA/SpoT domain protein; KEGG: eel:EUBELI_01032 1.5e-05 putative GTP pyrophosphokinase; K07816 putative GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50. (421 aa)    
Predicted Functional Partners:
EKY27840.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.798
EKY23319.1
KEGG: ebr:ECB_01448 7.3e-25 yddV; predicted diguanylate cyclase; K13069 diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 8.78.
    
  0.759
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
    0.539
EKY26434.1
Adenylate cyclase; KEGG: cbe:Cbei_4540 1.5e-63 adenylate cyclase; K05873 adenylate cyclase, class 2; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.512
EKY24041.1
Toxin-antitoxin system, toxin component, Bro family.
  
     0.480
EKY23485.1
Pentapeptide repeat protein; KEGG: btk:BT9727_2180 9.2e-05 acetyltransferase K00680; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.472
EKY26218.1
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
 0.440
EKY25816.1
HAD hydrolase, family IB.
  
     0.440
EKY22043.1
DEAD-box ATP-dependent RNA helicase CshA family protein; KEGG: cbk:CLL_A1477 2.4e-136 cold-shock deAd box protein A; Psort location: Cytoplasmic, score: 9.97.
       0.430
EKY28150.1
Response regulator receiver domain protein; KEGG: npu:Npun_R3197 2.4e-17 two component AraC family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
  
  0.403
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.