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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22044.1Hypothetical protein; KEGG: mmw:Mmwyl1_1378 0.0098 cobalamin (vitamin B12) biosynthesis CbiX protein; K03795 sirohydrochlorin cobaltochelatase; Psort location: Cytoplasmic, score: 7.50. (119 aa)    
Predicted Functional Partners:
EKY25404.1
Putative copper-sensing transcriptional repressor CsoR; Psort location: Cytoplasmic, score: 7.50.
  
    0.696
EKY28593.1
Cadmium-exporting ATPase; KEGG: amt:Amet_0130 3.0e-232 heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.566
EKY25403.1
Copper-exporting ATPase; KEGG: cbe:Cbei_4802 0. heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.566
EKY28615.1
Hypothetical protein; KEGG: ssa:SSA_2145 2.9e-09 estA; tributyrin esterase, putative K03930.
  
  
 0.539
EKY28650.1
Hypothetical protein; KEGG: smf:Smon_0763 0.0069 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
    
   0.473
sigI
Putative RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
    
   0.473
EKY24077.1
Hypothetical protein; KEGG: edi:EDI_341030 7.1e-05 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
    
   0.473
EKY28093.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
    
   0.463
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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