STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22050.1ABC transporter, ATP-binding protein; KEGG: ava:Ava_C0015 6.0e-51 ABC transporter-like K10826; Psort location: CytoplasmicMembrane, score: 8.78. (209 aa)    
Predicted Functional Partners:
EKY22049.1
KEGG: ava:Ava_C0014 5.4e-82 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; Psort location: CytoplasmicMembrane, score: 9.96.
 
0.993
EKY22048.1
KEGG: mru:mru_1616 8.7e-75 nikC1; nickel ABC transporter permease protein NikC1 K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.982
EKY22046.1
ABC transporter, substrate-binding protein, family 5; KEGG: efe:EFER_1783 6.4e-63 putative substrate-binding transport protein K02035; Psort location: Cellwall, score: 9.21.
 
 
 0.971
EKY22047.1
KEGG: mru:mru_1617 1.1e-90 nikB1; nickel ABC transporter permease protein NikB1 K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.970
EKY28599.1
Putative oligopeptide ABC transporter, permease protein OppC; KEGG: apb:SAR116_0601 9.4e-46 binding-protein-dependent transport systems inner membrane component K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.831
EKY28844.1
KEGG: lwe:lwe2133 4.6e-69 ABC transporter, ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
    
0.828
EKY23985.1
Oligopeptide ABC transporter, permease protein OppC.
 
 0.808
EKY23984.1
Putative oligopeptide transport system permease protein OppB.
 
 
 0.733
EKY28600.1
Putative oligopeptide transporter permease; KEGG: lba:Lebu_2290 1.1e-58 alkaline phosphatase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.729
EKY28598.1
KEGG: llk:LLKF_0402 2.0e-91 optD; oligopeptide ABC transporter ATP-binding protein K02031; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
0.581
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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